STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV47336.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: nis:NIS_1722 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family. (202 aa)    
Predicted Functional Partners:
ADV47337.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: nis:NIS_1718 patatin; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase.
       0.773
ADV47338.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sun:SUN_0277 efflux system, membrane fusion protein; PFAM: secretion protein HlyD family protein; SPTR: Efflux system, membrane fusion protein; PFAM: HlyD family secretion protein.
 
     0.710
ADV47334.1
Drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR004638: IPR011701: IPR001411; KEGG: nis:NIS_1720 major facilitator superfamily multidrug-efflux transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug-efflux transporter, MFS family; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
 
   
 0.661
ADV47333.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: nis:NIS_1719 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
 
   
 0.658
ADV47335.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: nis:NIS_1721 major facilitator superfamily multidrug-efflux transporter; PFAM: secretion protein HlyD family protein; SPTR: Multidrug-efflux transporter, MFS family; PFAM: HlyD family secretion protein.
 
     0.644
ADV46453.1
KEGG: ppr:PBPRB1440 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
ADV45491.1
KEGG: bmj:BMULJ_01390 putative bacteriophage protein; SPTR: Putative uncharacterized protein.
  
     0.631
ADV47340.1
ABC-2 type transporter; InterPro IPR000412: IPR013525; KEGG: sun:SUN_0280 multidrug ABC transporter; PFAM: ABC-2 type transporter; SPTR: Multidrug ABC transporter; PFAM: ABC-2 type transporter.
       0.539
ADV47341.1
ABC-2 type transporter; InterPro IPR000412: IPR013525: IPR013526; KEGG: sun:SUN_0281 multidrug ABC transporter, permease; PFAM: ABC-2 type transporter; SPTR: Multidrug ABC transporter, permease; PFAM: ABC-2 type transporter.
       0.539
ADV47339.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871: IPR003439: IPR003593; KEGG: sun:SUN_0279 multidrug ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Multidrug ABC transporter; PFAM: ABC transporter.
       0.534
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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