STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_00834Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators. (371 aa)    
Predicted Functional Partners:
SBI_08635
COG1609 Transcriptional regulators.
  
     0.768
SBI_00547
Regulatory protein DeoR; COG1609 Transcriptional regulators.
  
     0.728
SBI_00832
Solute-binding protein of ABC transporter system; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.674
SBI_08589
COG1609 Transcriptional regulators.
  
     0.669
SBI_00829
Hypothetical protein; COG3934 Endo-beta-mannanase.
 
     0.612
SBI_00831
COG1175 ABC-type sugar transport systems, permease components.
 
     0.595
SBI_00830
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
     0.586
SBI_00833
COG0383 Alpha-mannosidase.
  
    0.561
gltB
Putative glutamate synthase large subunit; COG0067 Glutamate synthase domain 1.
    
 
 0.532
SBI_08962
COG1609 Transcriptional regulators.
  
     0.476
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.