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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_02027COG2025 Electron transfer flavoprotein, alpha subunit. (320 aa)    
Predicted Functional Partners:
SBI_02028
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
fadE4
COG1960 Acyl-CoA dehydrogenases.
 
 0.899
fadE16
COG1960 Acyl-CoA dehydrogenases.
 
 0.899
SBI_06919
COG1960 Acyl-CoA dehydrogenases.
 
 0.898
fadE11
COG1960 Acyl-CoA dehydrogenases.
 
 0.897
fadE3
COG1960 Acyl-CoA dehydrogenases.
 
 0.896
fadE27
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.890
fadE30
COG1960 Acyl-CoA dehydrogenases.
 
 0.888
fadE34
COG1960 Acyl-CoA dehydrogenases.
 
 0.882
fadE13
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.877
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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