STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_02060COG1289 Predicted membrane protein. (502 aa)    
Predicted Functional Partners:
SBI_02059
Putative secreted protein; COG2706 3-carboxymuconate cyclase.
       0.767
SBI_04866
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
    0.746
SBI_02061
COG1522 Transcriptional regulators.
       0.745
SBI_02062
Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase.
       0.737
SBI_06833
Hypothetical protein.
 
     0.725
SBI_03317
Secreted protein.
  
     0.720
SBI_08053
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
   
    0.718
SBI_03755
M protein; COG3599 Cell division initiation protein.
  
     0.713
SBI_04662
Hypothetical protein.
  
     0.697
SBI_08061
Hypothetical protein.
  
     0.675
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.