STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_02762Putative polyketide-based spore pigment synthesis protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides. (400 aa)    
Predicted Functional Partners:
sppE
Cyclase II; PF04673: Polyketide synthesis cyclase, spore-pigment gene cluster.
     
 0.942
sppH
WhiE II-like protein; COG1396 Predicted transcriptional regulators, spore-pigment gene cluster.
  
    0.782
sppD
COG2867 Oligoketide cyclase/lipid transport protein,spore-pigment gene cluster.
  
    0.781
sppC
COG0236 Acyl carrier protein, spore-pigment gene cluster.
       0.780
sppF
Polyketide hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, spore-pigment gene cluster.
     
 0.753
SBI_02772
COG3764 Sortase (surface protein transpeptidase).
  
  
 0.721
sppA
3-oxoacyl-ACP synthase I; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase, spore-pigment gene cluster; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.657
sppB
Putative polyketide beta-ketoacyl synthase 2; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase, spore-pigment gene cluster; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.623
SBI_02530
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
     
 0.509
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.