Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBI_00134 | mshD | SBI_00134 | SBI_05018 | Hypothetical protein; COG2513 PEP phosphonomutase and related enzymes. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.718 |
SBI_03031 | SBI_09799 | SBI_03031 | SBI_09799 | Hypothetical protein. | COG2120 Uncharacterized proteins, LmbE homologs. | 0.486 |
SBI_03031 | cysS2 | SBI_03031 | SBI_08453 | Hypothetical protein. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.689 |
SBI_03031 | mca | SBI_03031 | SBI_04268 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.778 |
SBI_03031 | mshA | SBI_03031 | SBI_05009 | Hypothetical protein. | Glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.552 |
SBI_03031 | mshB | SBI_03031 | SBI_04101 | Hypothetical protein. | Putative N-acetyl-1-D-myo-inosityl-2-amino-2- deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.714 |
SBI_03031 | mshD | SBI_03031 | SBI_05018 | Hypothetical protein. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.776 |
SBI_07090 | SBI_09799 | SBI_07090 | SBI_09799 | Hypothetical protein. | COG2120 Uncharacterized proteins, LmbE homologs. | 0.551 |
SBI_07090 | cysS2 | SBI_07090 | SBI_08453 | Hypothetical protein. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.702 |
SBI_07090 | mca | SBI_07090 | SBI_04268 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.779 |
SBI_07090 | mshA | SBI_07090 | SBI_05009 | Hypothetical protein. | Glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.534 |
SBI_07090 | mshB | SBI_07090 | SBI_04101 | Hypothetical protein. | Putative N-acetyl-1-D-myo-inosityl-2-amino-2- deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.738 |
SBI_07090 | mshD | SBI_07090 | SBI_05018 | Hypothetical protein. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.781 |
SBI_09799 | SBI_03031 | SBI_09799 | SBI_03031 | COG2120 Uncharacterized proteins, LmbE homologs. | Hypothetical protein. | 0.486 |
SBI_09799 | SBI_07090 | SBI_09799 | SBI_07090 | COG2120 Uncharacterized proteins, LmbE homologs. | Hypothetical protein. | 0.551 |
SBI_09799 | cysS2 | SBI_09799 | SBI_08453 | COG2120 Uncharacterized proteins, LmbE homologs. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.622 |
SBI_09799 | mca | SBI_09799 | SBI_04268 | COG2120 Uncharacterized proteins, LmbE homologs. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.418 |
SBI_09799 | mshA | SBI_09799 | SBI_05009 | COG2120 Uncharacterized proteins, LmbE homologs. | Glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.450 |
SBI_09799 | mshD | SBI_09799 | SBI_05018 | COG2120 Uncharacterized proteins, LmbE homologs. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.750 |
cysS2 | SBI_03031 | SBI_08453 | SBI_03031 | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | Hypothetical protein. | 0.689 |
page 1 of 3