STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_05884Hypothetical protein. (218 aa)    
Predicted Functional Partners:
SBI_09400
Hypothetical protein.
  
     0.669
SBI_02215
NADH dehydrogenase subunit.
  
     0.561
SBI_05883
Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
       0.560
SBI_00884
All-trans-retinol 13,14-reductase; COG1233 Phytoene dehydrogenase and related proteins.
  
     0.553
SBI_05882
Hypothetical protein.
       0.509
SBI_09362
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.469
SBI_00582
Putative transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
  
     0.442
SBI_01924
COG4312 Uncharacterized protein conserved in bacteria.
  
     0.421
SBI_01225
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.405
SBI_00894
Hypothetical protein.
  
     0.401
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.