STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_07646COG0236 Acyl carrier protein. (90 aa)    
Predicted Functional Partners:
SBI_07645
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.788
SBI_07647
Acyl-(acyl-carrier-protein) desaturase; COG0208 Ribonucleotide reductase, beta subunit.
       0.788
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
       0.788
SBI_07649
Putative aminotransferase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
       0.788
SBI_07651
O-methyltransferase family 2; COG0500 SAM-dependent methyltransferases.
       0.788
SBI_07650
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.774
SBI_07652
Isobutylamine N-hydroxylase; COG1960 Acyl-CoA dehydrogenases.
       0.594
SBI_07654
Hypothetical protein.
       0.477
SBI_07653
MMPL family protein; COG2409 Predicted drug exporters of the RND superfamily.
       0.463
SBI_07655
Hypothetical protein.
       0.434
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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