STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_09890WD40 repeat-domain-containing protein-like protein; COG0515 Serine/threonine protein kinase. (1131 aa)    
Predicted Functional Partners:
SBI_09891
COG0515 Serine/threonine protein kinase.
 
 
0.799
SBI_05075
Regulatory protein; COG0789 Predicted transcriptional regulators.
 
 
 0.792
SBI_05409
COG0631 Serine/threonine protein phosphatase.
 
 
 0.781
SBI_01600
COG0515 Serine/threonine protein kinase.
  
    0.755
SBI_06403
COG0515 Serine/threonine protein kinase.
 
    0.755
SBI_00892
COG0515 Serine/threonine protein kinase.
 
    0.739
SBI_05178
COG0515 Serine/threonine protein kinase.
  
    0.738
SBI_03389
COG0515 Serine/threonine protein kinase.
  
    0.707
SBI_04767
Hypothetical protein.
    
 0.655
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.626
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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