STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhBKEGG: sth:STH3174 1.9e-77 sdhB; succinate dehydrogenase iron-sulfur subunit K00240; Psort location: CytoplasmicMembrane, score: 7.88. (250 aa)    
Predicted Functional Partners:
sdhC
KEGG: afl:Aflv_0580 1.8e-40 sdhC; succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b-556 subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
sdhA
KEGG: lsp:Bsph_4053 5.1e-180 sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
EFW30731.1
Tat pathway signal sequence domain protein; KEGG: glo:Glov_0945 3.0e-25 succinate dehydrogenase; Psort location: Periplasmic, score: 9.76.
  
 0.998
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
 0.996
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 0.996
EFW28975.1
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; KEGG: wsu:WS1767 5.6e-71 fumarate hydratase B, beta subunit; K01678 fumarate hydratase subunit beta; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.988
EFW28974.1
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; KEGG: wsu:WS1766 9.2e-94 fumarate hydratase K01677; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.986
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.985
nifJ
KEGG: cby:CLM_3126 0. pyruvate ferredoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.972
EFW30204.1
4Fe-4S binding domain protein; KEGG: hmo:HM1_2201 7.5e-28 nuoI; proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain I; K00338 NADH dehydrogenase I subunit I.
   
 
 0.949
Your Current Organism:
Selenomonas artemidis
NCBI taxonomy Id: 749551
Other names: S. artemidis F0399, Selenomonas artemidis F0399, Selenomonas artemidis str. F0399, Selenomonas artemidis strain F0399
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.