STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0012Biphenyl dioxygenase, Rieske iron-sulfur component related protein. (105 aa)    
Predicted Functional Partners:
FAD_0013
Electron transfer flavoprotein alpha and beta-subunit.
       0.927
FAD_0339
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.551
FAD_0010
SMP-30/gluconolaconase/LRE domain-containing protein.
     
 0.519
FAD_0342
Sulfide dehydrogenase (flavocytochrome C).
  
 
 0.470
FAD_1225
NADH dehydrogenase.
  
 
 0.470
FAD_1731
NAD(FAD)-dependent dehydrogenase.
  
 
 0.470
FAD_1840
Sulfide-quinone oxidoreductase.
  
 
 0.470
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.