STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0146Ferredoxin. (742 aa)    
Predicted Functional Partners:
FAD_0145
Cytochrome c oxidase assembly factor.
       0.762
FAD_0623
NADH dehydrogenase subunit I.
  
 
 0.735
FAD_0257
Putative 4Fe-4S ferredoxin, iron-sulfur binding protein.
  
 
 0.716
FAD_1852
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.716
FAD_0147
Hypothetical protein.
       0.569
FAD_0391
Copper transporting ATPase.
  
  
 0.531
FAD_0903
Formate dehydrogenase alpha chain.
  
  
 0.470
FAD_1471
Formate dehydrogenase subunit alpha.
  
  
 0.470
FAD_0386
Hypothetical protein.
  
  
 0.469
FAD_0341
Indolepyruvate oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
  
 0.466
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.