STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0152Cytochrome c oxidase polypeptide I/III; Belongs to the heme-copper respiratory oxidase family. (835 aa)    
Predicted Functional Partners:
FAD_0155
Cytochrome c oxidase polypeptide II.
 
 0.999
soxC
Cytochrome B subunit.
 
 
 0.999
FAD_0386
Hypothetical protein.
  
 
 0.999
FAD_0628
NADH dehydrogenase subunit M.
  
 
 0.999
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.996
ubiA
Prenyltransferase UbiA family protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.995
FAD_0622
NADH dehydrogenase subunit H.
  
 
 0.990
FAD_0629
NADH dehydrogenase subunit N.
  
 
 0.951
FAD_0618
NADH dehydrogenase subunit A.
   
 
 0.877
FAD_0620
NADH dehydrogenase subunit C.
   
 
 0.863
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.