STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0244Aldo/keto reductase. (270 aa)    
Predicted Functional Partners:
FAD_0747
Oxidoreductase.
 
 
0.574
FAD_1024
Oxidoreductase.
 
 
0.555
nep1
Ribosome biogenesis protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
  
    0.503
FAD_0242
Putative CaaX prenyl protease 1.
     
 0.480
FAD_0294
Zinc-binding alcohol dehydrogenase.
  
  
 0.464
FAD_0184
Hypothetical protein.
   
    0.450
rps15
30S ribosomal protein S15P.
  
    0.429
FAD_1201
Putative translaldolase; Multipass membrane protein with frameshifts and 400 bp insertion.
  
 
 0.422
FAD_1475
Putative translaldolase.
  
 
 0.422
recJ
single-stranded-DNA-specific exonuclease RecJ.
     
 0.409
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.