STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0257Putative 4Fe-4S ferredoxin, iron-sulfur binding protein. (100 aa)    
Predicted Functional Partners:
FAD_0717
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.753
FAD_0146
Ferredoxin.
  
 
 0.716
FAD_1539
Electron transfer flavoprotein subunit beta.
   
 
 0.657
FAD_0340
Indolepyruvate oxidoreductase subunit beta.
  
  
 0.522
FAD_0258
Cell division control protein MCM; Belongs to the MCM family.
       0.496
FAD_1160
Ferredoxin like protein.
     
 0.489
FAD_1661
4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
 0.489
sufC
FeS assembly ATPase SufC.
     
 0.484
FAD_0633
Cysteine desulfurase.
     
 0.482
sufB
Intein-containing FeS assembly protein SufB precursor.
     
 0.480
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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