Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAD_0225 | FAD_1849 | FAD_0225 | FAD_1849 | Putative arginase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.461 |
FAD_0225 | dys | FAD_0225 | FAD_0214 | Putative arginase; Belongs to the arginase family. | Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.650 |
FAD_0225 | leuS | FAD_0225 | FAD_0309 | Putative arginase; Belongs to the arginase family. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.479 |
FAD_0225 | pdaD | FAD_0225 | FAD_0310 | Putative arginase; Belongs to the arginase family. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.952 |
FAD_0225 | speH | FAD_0225 | FAD_0595 | Putative arginase; Belongs to the arginase family. | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.541 |
FAD_0311 | leuS | FAD_0311 | FAD_0309 | ATP-dependent RNA helicase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.540 |
FAD_0311 | pdaD | FAD_0311 | FAD_0310 | ATP-dependent RNA helicase. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.540 |
FAD_0428 | FAD_1849 | FAD_0428 | FAD_1849 | Arginine deiminase. | Argininosuccinate lyase. | 0.925 |
FAD_0428 | pdaD | FAD_0428 | FAD_0310 | Arginine deiminase. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.805 |
FAD_1849 | FAD_0225 | FAD_1849 | FAD_0225 | Argininosuccinate lyase. | Putative arginase; Belongs to the arginase family. | 0.461 |
FAD_1849 | FAD_0428 | FAD_1849 | FAD_0428 | Argininosuccinate lyase. | Arginine deiminase. | 0.925 |
FAD_1849 | leuS | FAD_1849 | FAD_0309 | Argininosuccinate lyase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.411 |
FAD_1849 | pdaD | FAD_1849 | FAD_0310 | Argininosuccinate lyase. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.800 |
dys | FAD_0225 | FAD_0214 | FAD_0225 | Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Putative arginase; Belongs to the arginase family. | 0.650 |
dys | pdaD | FAD_0214 | FAD_0310 | Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.614 |
gcvH | mntH | FAD_0112 | FAD_1593 | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Manganese/divalent cation transporter. | 0.499 |
gcvH | pdaD | FAD_0112 | FAD_0310 | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.501 |
leuS | FAD_0225 | FAD_0309 | FAD_0225 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Putative arginase; Belongs to the arginase family. | 0.479 |
leuS | FAD_0311 | FAD_0309 | FAD_0311 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | ATP-dependent RNA helicase. | 0.540 |
leuS | FAD_1849 | FAD_0309 | FAD_1849 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Argininosuccinate lyase. | 0.411 |
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