STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0323ABC-2-type family transporter ATPase. (304 aa)    
Predicted Functional Partners:
FAD_0322
ABC-2-type family permease.
  
 
 0.917
FAD_0324
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.734
FAD_1177
ABC-2-type family permease.
  
 
 0.616
FAD_1826
ABC transporter permease.
  
 
 0.616
FAD_0413
Lipid exporter family ATPase and permease.
 
0.571
FAD_0321
Pirin domain-containing protein; Belongs to the pirin family.
       0.566
FAD_1026
ABC-type sugar transporter, ATPase component.
 
    
0.566
FAD_0161
50S ribosomal protein L2P.
  
 
   0.557
FAD_0414
Lipid exporter family ATPase and permease.
 
0.550
FAD_0325
Transcriptional activator.
       0.546
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.