STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0341Indolepyruvate oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (623 aa)    
Predicted Functional Partners:
FAD_0340
Indolepyruvate oxidoreductase subunit beta.
 
 
 0.987
FAD_0717
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.904
FAD_0338
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
       0.850
FAD_0337
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.554
FAD_1726
acyl-CoA synthetase.
   
 
 0.539
FAD_0339
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.523
FAD_0342
Sulfide dehydrogenase (flavocytochrome C).
     
 0.503
FAD_0343
Hypothetical protein.
       0.493
FAD_0146
Ferredoxin.
  
  
 0.466
FAD_0924
Phosphoadenosine phosphosulfate reductase; Transposase fragments.
     
 0.461
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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