Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FAD_0391Copper transporting ATPase. (676 aa)    
Predicted Functional Partners:
arsR
Arsenite-dependent repressor.
  
  
 0.899
FAD_0390
Transcriptional regulatory protein.
     
 0.869
xerD
Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Belongs to the 'phage' integrase family. XerA subfamily.
  
  
 0.694
FAD_1603
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.678
tgtA
7-cyano-7-deazaguanine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
       0.650
FAD_0392
ATP/GTP binding protein.
       0.645
FAD_0516
Potassium-transporting ATPase subunit C.
     
 0.562
FAD_0249
Cation diffusion facilitator family transporter.
  
  
 0.561
FAD_0498
H+-transporting ATPase related protein.
 
 
0.513
FAD_1376
Hypothetical protein.
 
 
0.503
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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