gar1 protein (Ferroplasma acidiphilum) - STRING interaction network

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Score

gar1

H/ACA RNP protein Gar1. (70 aa)

Predicted Functional Partners:

cbf5

0.999

nop10

0.999

rpl7ae

0.995

nop5

0.891

tfb

0.825

FAD_1773

0.729

tfb-2

0.600

FAD_0369

0.580

pyrG

0.577

rps8e

0.550

Your Current Organism:

Ferroplasma acidiphilum

NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAD_0369	FAD_1773	FAD_0369	FAD_1773	GTP-binding protein.	GMP synthase subunit B.	0.689
FAD_0369	cbf5	FAD_0369	FAD_0186	GTP-binding protein.	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	0.771
FAD_0369	gar1	FAD_0369	FAD_0419	GTP-binding protein.	H/ACA RNP protein Gar1.	0.580
FAD_0369	nop5	FAD_0369	FAD_0187	GTP-binding protein.	Box C/D RNP protein Nop5.	0.972
FAD_0369	pyrG	FAD_0369	FAD_1721	GTP-binding protein.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.625
FAD_0369	rpl7ae	FAD_0369	FAD_0589	GTP-binding protein.	Multifunctional RNA-binding protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.887
FAD_0369	rps8e	FAD_0369	FAD_0412	GTP-binding protein.	30S ribosomal protein S8e.	0.999
FAD_1773	FAD_0369	FAD_1773	FAD_0369	GMP synthase subunit B.	GTP-binding protein.	0.689
FAD_1773	cbf5	FAD_1773	FAD_0186	GMP synthase subunit B.	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	0.851
FAD_1773	gar1	FAD_1773	FAD_0419	GMP synthase subunit B.	H/ACA RNP protein Gar1.	0.729
FAD_1773	nop5	FAD_1773	FAD_0187	GMP synthase subunit B.	Box C/D RNP protein Nop5.	0.824
FAD_1773	pyrG	FAD_1773	FAD_1721	GMP synthase subunit B.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.964
cbf5	FAD_0369	FAD_0186	FAD_0369	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	GTP-binding protein.	0.771
cbf5	FAD_1773	FAD_0186	FAD_1773	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	GMP synthase subunit B.	0.851
cbf5	gar1	FAD_0186	FAD_0419	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	H/ACA RNP protein Gar1.	0.999
cbf5	nop10	FAD_0186	FAD_1657	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	H/ACA RNP protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.	0.999
cbf5	nop5	FAD_0186	FAD_0187	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	Box C/D RNP protein Nop5.	0.999
cbf5	pyrG	FAD_0186	FAD_1721	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.514
cbf5	rpl7ae	FAD_0186	FAD_0589	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	Multifunctional RNA-binding protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.998
cbf5	rps8e	FAD_0186	FAD_0412	H/ACA RNP pseudouridine synthase Cbf5; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	30S ribosomal protein S8e.	0.600