Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (312 aa)    
Predicted Functional Partners:
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.827
metX
methionyl-tRNA synthetase tRNA-binding subunit.
     
 0.761
FAD_1775
tRNA splicing endonuclease.
  
  
 0.755
FAD_0107
Triosephosphate isomerase; Belongs to the triosephosphate isomerase family.
     
 0.733
rtcB
RtcB protein; Belongs to the RtcB family.
     
 0.730
FAD_0105
Tryptophan synthase alpha chain.
     
 0.729
FAD_0137
Translation initiation factor IF-2 subunit gamma.
   
  
 0.715
FAD_0040
Exosome complex exonuclease Rrp41.
  
  
 0.697
FAD_1651
Methyltransferase.
  
    0.664
FAD_0606
S2P/M50-1 group multipass membrane metalloprotease.
       0.660
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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