Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FAD_0528FeS oxidoreductase. (351 aa)    
Predicted Functional Partners:
FAD_0222
Archaeosine tRNA-ribosyltransferase.
 
     0.869
surE
Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
     0.709
FAD_0427
NMD protein affecting ribosome stability and mRNA decay.
  
     0.682
FAD_1773
GMP synthase subunit B.
       0.660
FAD_0288
Hypothetical protein; Belongs to the UPF0179 family.
  
     0.659
FAD_1584
Molybdenum cofactor biosynthesis protein A.
  
     0.659
FAD_0115
Hypothetical protein.
  
     0.642
FAD_0096
Helix-turn-helix domain protein.
  
     0.633
FAD_0130
Hypothetical protein.
       0.633
FAD_0086
Phosphoserine phosphatase.
  
     0.623
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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