Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FAD_0677Monocarboxylic acid/H+ symporter MctP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (505 aa)    
Predicted Functional Partners:
FAD_0676
Hypothetical protein.
     
 0.898
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
     
 0.699
FAD_1145
Gamma-glutamyltranspeptidase.
 
  
 0.550
FAD_1260
Inorganic phosphate:H+ symporter family transporter; COG0477.
  
  
 0.514
FAD_1029
ABC-type sugar transporter, extracellular component.
 
  
 0.497
FAD_0225
Putative arginase; Belongs to the arginase family.
  
  
 0.474
FAD_0674
Na(+)/H(+) antiporter.
     
 0.466
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A.
  
  
 0.409
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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