STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_07002-keto-3-deoxy gluconate aldolase. (290 aa)    
Predicted Functional Partners:
FAD_0277
ROK family glucokinase.
 
 
 0.943
FAD_1035
Mandelate racemase subfamily protein.
    
 0.912
FAD_1816
Mandelate racemase subfamily protein.
    
 0.912
FAD_0107
Triosephosphate isomerase; Belongs to the triosephosphate isomerase family.
  
 
 0.896
rps17e
30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
    0.865
FAD_0530
Chorismate mutase.
  
  
 0.860
FAD_0602
Phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family.
    
 0.858
FAD_0295
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.854
gap
Glyceraldehyde-3-phosphate dehydrogenase.
   
 
 0.853
FAD_0637
Diaminopimelate decarboxylase.
 
  
 0.852
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.