STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_07132-oxoglutarate ferredoxin oxidoreductase subunit beta. (316 aa)    
Predicted Functional Partners:
FAD_0712
2-oxoglutarate synthase, alpha chain.
 0.999
FAD_0567
2-oxoacid--ferredoxin oxidoreductase, alpha subunit.
 0.995
sucD
succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.955
FAD_0709
succinyl-CoA synthetase subunit beta.
  
 
 0.954
FAD_0340
Indolepyruvate oxidoreductase subunit beta.
  
 
 0.939
FAD_1603
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.924
FAD_1726
acyl-CoA synthetase.
    
 0.919
FAD_0703
Malate oxidoreductase (malic enzyme).
    
 0.916
FAD_1758
Branched-chain alpha-keto acid dehydrogenase subunit E2.
   
 
 0.916
FAD_1100
Citrate synthase.
   
 
 0.914
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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