Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FAD_0729Oxidoreductase. (317 aa)    
Predicted Functional Partners:
FAD_0730
Hypothetical protein.
       0.580
FAD_1029
ABC-type sugar transporter, extracellular component.
 
   
 0.558
FAD_0010
SMP-30/gluconolaconase/LRE domain-containing protein.
 
  
 0.544
FAD_0876
Glucose-1-phosphate thymidylyltransferase (graD-2).
 
  
 0.542
FAD_0692
Pantothenate kinase.
    
 0.530
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
   
 
 0.504
FAD_1226
Dolichol-phosphate mannosyltransferase.
  
  
 0.494
FAD_0197
Porphobilinogen deaminase.
       0.493
FAD_1028
ABC-type sugar transporter, permease component.
 
   
 0.484
FAD_1027
ABC-type sugar transporter, permease component.
 
   
 0.480
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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