Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FAD_0773FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (341 aa)    
Predicted Functional Partners:
FAD_1381
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
  
 
 0.587
FAD_0774
Intracellular proteinase I.
   
   0.547
FAD_0718
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.491
FAD_0627
NADH-quinone oxidoreductase chain L.
  
  
 0.477
FAD_1601
Peptidyl-prolyl cis-trans isomerase.
  
    0.455
FAD_0772
Hypothetical protein.
       0.424
FAD_1225
NADH dehydrogenase.
 
  
0.403
FAD_0771
Tetratricopeptide repeat-containing protein.
 
     0.402
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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