STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_0802Amino acid/polyamine/organocation superfamily transporter. (471 aa)    
Predicted Functional Partners:
FAD_0234
Amino acid permease.
  
     0.636
FAD_0801
Major facilitator superfamily multidrug efflux pump.
       0.628
FAD_1571
Amino acid transporter.
  
     0.589
FAD_1575
Hypothetical protein.
  
     0.570
FAD_1086
Amino acid permease.
  
     0.558
FAD_0800
Nucleotide pyrophosphatase/phosphodiesterase I.
 
     0.519
FAD_1349
Major facilitator superfamily permease.
  
   0.446
FAD_0468
Allantoin permease family protein.
  
    0.437
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.