Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FAD_1015ABC-type peptide/opine/nickel family transporter ATPase. (300 aa)    
Predicted Functional Partners:
FAD_0659
ABC transporter permease.
 0.998
FAD_0686
ABC-type peptide/opine/nickel family permease.
 
 0.983
FAD_0687
ABC-type peptide/opine/nickel family permease.
 
 0.981
FAD_0688
ABC-type peptide/opine/nickel family transporter ATPase.
 
 
0.966
FAD_0091
ABC-type peptide transport system, solute-binding component.
 
 0.955
FAD_0655
ABC transporter substrate-binding protein.
  
 0.955
FAD_0658
Hypothetical protein.
  
  
 
0.918
FAD_1026
ABC-type sugar transporter, ATPase component.
 
    
0.913
FAD_1014
ABC-type peptide/opine/nickel family transporter ATPase.
 
  
0.880
FAD_0660
ABC transporter permease.
 
 
 0.845
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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