Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FAD_1072Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)    
Predicted Functional Partners:
FAD_1071
1,3-propanediol dehydrogenase.
 
 
 0.878
FAD_0701
Aconitate hydratase.
  
 0.584
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
  
 0.567
FAD_1115
Alcohol dehydrogenase IV.
 
 
 0.540
FAD_0718
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.529
FAD_0434
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.496
FAD_0225
Putative arginase; Belongs to the arginase family.
  
 0.470
rps2
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 0.467
FAD_1290
Dehydrogenase, E1 component.
  
 0.463
FAD_1757
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.463
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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