STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_1100Citrate synthase. (372 aa)    
Predicted Functional Partners:
FAD_0701
Aconitate hydratase.
  
 0.993
FAD_0718
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.992
FAD_1758
Branched-chain alpha-keto acid dehydrogenase subunit E2.
  
 0.971
FAD_1022
Acetyl-coenzyme A synthetase.
  
 0.957
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
   
 
 0.954
FAD_0567
2-oxoacid--ferredoxin oxidoreductase, alpha subunit.
   
 
 0.951
FAD_0712
2-oxoglutarate synthase, alpha chain.
   
 
 0.951
FAD_0434
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.934
FAD_0051
acetyl-CoA acetyltransferase.
  
 0.927
FAD_1242
acetyl-CoA acetyltransferase.
  
 0.927
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.