Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAD_1227Transcriptional regulator. (342 aa)    
Predicted Functional Partners:
FAD_0690
Hypothetical protein.
  
   
 0.661
FAD_1228
Alkyl hydroperoxide reductase subunit c.
       0.616
tbp
Transcription factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
  
   
 0.590
FAD_0762
Hypothetical protein.
  
     0.526
FAD_1701
AsnC family transcriptional regulator.
  
   
 0.517
FAD_0596
Transcriptional regulator.
  
     0.480
FAD_1099
Metallophosphoesterase.
  
     0.468
cdc6-1
Cell division control protein 6; Involved in regulation of DNA replication.
  
     0.461
FAD_1601
Peptidyl-prolyl cis-trans isomerase.
  
     0.456
FAD_0496
Nucleoside-diphosphate-sugar epimerase.
  
     0.450
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.