STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_1270acyl-CoA dehydrogenase. (550 aa)    
Predicted Functional Partners:
FAD_1539
Electron transfer flavoprotein subunit beta.
 
 
 0.848
FAD_1271
medium-chain-fatty-acid-CoA ligase.
 
  
 0.841
FAD_1712
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.827
FAD_0013
Electron transfer flavoprotein alpha and beta-subunit.
 
 
 0.806
FAD_1162
Electron transfer flavoprotein alpha and beta-subunit.
 
 
 0.805
FAD_1293
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.804
FAD_1538
Electron transfer flavoprotein alpha subunit.
 
 0.795
FAD_0754
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.762
FAD_1277
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.625
FAD_0623
NADH dehydrogenase subunit I.
  
 0.614
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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