FAD_1466 protein (Ferroplasma acidiphilum) - STRING interaction network

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Score

FAD_1466

DNA repair helicase. (443 aa)

Predicted Functional Partners:

FAD_1465

0.995

FAD_1503

0.937

fen1

0.897

rpoH

0.863

tbp

0.849

FAD_0207

0.844

rpoD

0.844

rpoK

0.840

FAD_0043

0.836

rpoN

0.834

Your Current Organism:

Ferroplasma acidiphilum

NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAD_0043	FAD_0207	FAD_0043	FAD_0207	DNA-directed RNA polymerase subunit P.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
FAD_0043	FAD_1466	FAD_0043	FAD_1466	DNA-directed RNA polymerase subunit P.	DNA repair helicase.	0.836
FAD_0043	FAD_1503	FAD_0043	FAD_1503	DNA-directed RNA polymerase subunit P.	DNA repair helicase.	0.950
FAD_0043	rpoD	FAD_0043	FAD_0263	DNA-directed RNA polymerase subunit P.	DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family.	0.999
FAD_0043	rpoH	FAD_0043	FAD_0208	DNA-directed RNA polymerase subunit P.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.999
FAD_0043	rpoK	FAD_0043	FAD_1762	DNA-directed RNA polymerase subunit P.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.999
FAD_0043	rpoN	FAD_0043	FAD_1595	DNA-directed RNA polymerase subunit P.	DNA-directed RNA polymerase subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family.	0.999
FAD_0043	tbp	FAD_0043	FAD_1781	DNA-directed RNA polymerase subunit P.	Transcription factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.957
FAD_0207	FAD_0043	FAD_0207	FAD_0043	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit P.	0.999
FAD_0207	FAD_1466	FAD_0207	FAD_1466	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA repair helicase.	0.844
FAD_0207	FAD_1503	FAD_0207	FAD_1503	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA repair helicase.	0.946
FAD_0207	fen1	FAD_0207	FAD_0558	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Flap endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Act [...]	0.785
FAD_0207	rpoD	FAD_0207	FAD_0263	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family.	0.999
FAD_0207	rpoH	FAD_0207	FAD_0208	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.999
FAD_0207	rpoK	FAD_0207	FAD_1762	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.999
FAD_0207	rpoN	FAD_0207	FAD_1595	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family.	0.999
FAD_0207	tbp	FAD_0207	FAD_1781	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.962
FAD_1465	FAD_1466	FAD_1465	FAD_1466	Putative nuclease.	DNA repair helicase.	0.995
FAD_1466	FAD_0043	FAD_1466	FAD_0043	DNA repair helicase.	DNA-directed RNA polymerase subunit P.	0.836
FAD_1466	FAD_0207	FAD_1466	FAD_0207	DNA repair helicase.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.844