STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_1494Monovalent cation:proton antiporter-2 family transporter. (534 aa)    
Predicted Functional Partners:
FAD_0516
Potassium-transporting ATPase subunit C.
   
  
 0.802
FAD_0655
ABC transporter substrate-binding protein.
 
   
 0.606
FAD_0989
TetR family transcriptional regulator.
 
   
 0.597
FAD_0674
Na(+)/H(+) antiporter.
   
 
 0.594
FAD_0525
Hypothetical protein.
 
     0.548
FAD_1503
DNA repair helicase.
  
    0.535
FAD_1040
Major facilitator superfamily permease.
  
     0.523
FAD_0346
Mechanosensitive ion channel.
 
   
 0.503
FAD_0496
Nucleoside-diphosphate-sugar epimerase.
  
     0.497
cas3
CRISPR-associated helicase Cas3.
  
     0.491
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.