Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAD_0346 | FAD_0516 | FAD_0346 | FAD_0516 | Mechanosensitive ion channel. | Potassium-transporting ATPase subunit C. | 0.842 |
FAD_0346 | FAD_1494 | FAD_0346 | FAD_1494 | Mechanosensitive ion channel. | Monovalent cation:proton antiporter-2 family transporter. | 0.503 |
FAD_0496 | FAD_0655 | FAD_0496 | FAD_0655 | Nucleoside-diphosphate-sugar epimerase. | ABC transporter substrate-binding protein. | 0.492 |
FAD_0496 | FAD_0989 | FAD_0496 | FAD_0989 | Nucleoside-diphosphate-sugar epimerase. | TetR family transcriptional regulator. | 0.542 |
FAD_0496 | FAD_1040 | FAD_0496 | FAD_1040 | Nucleoside-diphosphate-sugar epimerase. | Major facilitator superfamily permease. | 0.483 |
FAD_0496 | FAD_1494 | FAD_0496 | FAD_1494 | Nucleoside-diphosphate-sugar epimerase. | Monovalent cation:proton antiporter-2 family transporter. | 0.497 |
FAD_0516 | FAD_0346 | FAD_0516 | FAD_0346 | Potassium-transporting ATPase subunit C. | Mechanosensitive ion channel. | 0.842 |
FAD_0516 | FAD_1494 | FAD_0516 | FAD_1494 | Potassium-transporting ATPase subunit C. | Monovalent cation:proton antiporter-2 family transporter. | 0.802 |
FAD_0525 | FAD_0655 | FAD_0525 | FAD_0655 | Hypothetical protein. | ABC transporter substrate-binding protein. | 0.615 |
FAD_0525 | FAD_1040 | FAD_0525 | FAD_1040 | Hypothetical protein. | Major facilitator superfamily permease. | 0.509 |
FAD_0525 | FAD_1494 | FAD_0525 | FAD_1494 | Hypothetical protein. | Monovalent cation:proton antiporter-2 family transporter. | 0.548 |
FAD_0655 | FAD_0496 | FAD_0655 | FAD_0496 | ABC transporter substrate-binding protein. | Nucleoside-diphosphate-sugar epimerase. | 0.492 |
FAD_0655 | FAD_0525 | FAD_0655 | FAD_0525 | ABC transporter substrate-binding protein. | Hypothetical protein. | 0.615 |
FAD_0655 | FAD_0989 | FAD_0655 | FAD_0989 | ABC transporter substrate-binding protein. | TetR family transcriptional regulator. | 0.546 |
FAD_0655 | FAD_1040 | FAD_0655 | FAD_1040 | ABC transporter substrate-binding protein. | Major facilitator superfamily permease. | 0.626 |
FAD_0655 | FAD_1494 | FAD_0655 | FAD_1494 | ABC transporter substrate-binding protein. | Monovalent cation:proton antiporter-2 family transporter. | 0.606 |
FAD_0655 | FAD_1503 | FAD_0655 | FAD_1503 | ABC transporter substrate-binding protein. | DNA repair helicase. | 0.446 |
FAD_0655 | cas3 | FAD_0655 | FAD_0941 | ABC transporter substrate-binding protein. | CRISPR-associated helicase Cas3. | 0.434 |
FAD_0674 | FAD_1494 | FAD_0674 | FAD_1494 | Na(+)/H(+) antiporter. | Monovalent cation:proton antiporter-2 family transporter. | 0.594 |
FAD_0989 | FAD_0496 | FAD_0989 | FAD_0496 | TetR family transcriptional regulator. | Nucleoside-diphosphate-sugar epimerase. | 0.542 |
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