STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_1576Hypothetical protein. (252 aa)    
Predicted Functional Partners:
FAD_1577
Hypothetical protein.
  
  
 0.554
mre11
DNA repair protein; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family.
  
 
 0.510
FAD_0005
Peptidyl-prolyl cis-trans isomerase.
   
 
 0.505
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A.
  
 0.502
FAD_0629
NADH dehydrogenase subunit N.
   
   0.461
FAD_0621
NADH dehydrogenase subunit D.
   
   0.448
FAD_0618
NADH dehydrogenase subunit A.
    
 
 0.446
FAD_0620
NADH dehydrogenase subunit C.
   
 
 0.433
FAD_0623
NADH dehydrogenase subunit I.
    
 
 0.430
FAD_0619
NADH dehydrogenase subunit B; Belongs to the complex I 20 kDa subunit family.
   
 
 0.425
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.