STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAD_16614Fe-4S ferredoxin iron-sulfur binding domain protein. (88 aa)    
Predicted Functional Partners:
fixC
Oxidoreductase with FAD/NAD(P)-binding domain.
 
 
 0.963
FAD_1539
Electron transfer flavoprotein subunit beta.
  
 0.911
FAD_1162
Electron transfer flavoprotein alpha and beta-subunit.
 
 0.868
FAD_1538
Electron transfer flavoprotein alpha subunit.
  
 0.855
FAD_0013
Electron transfer flavoprotein alpha and beta-subunit.
  
 0.847
FAD_1161
Dehydrogenase (flavoprotein).
 
 
 0.839
FAD_1079
Digeranylgeranylglycerophospholipid reductase; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains; Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily.
 
 
 0.638
FAD_1659
Hypothetical protein.
       0.580
FAD_0633
Cysteine desulfurase.
  
   
 0.529
FAD_1231
Dehydrogenase (flavoprotein).
  
 
 0.519
Your Current Organism:
Ferroplasma acidiphilum
NCBI taxonomy Id: 74969
Other names: DSM 12658, F. acidiphilum, Ferromonas metallovorans, Ferroplasma acidiphilum Golyshina et al. 2000, JCM 10970
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