Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAD_1806 | FAD_1807 | FAD_1806 | FAD_1807 | Hypothetical protein. | Hypothetical protein. | 0.682 |
FAD_1806 | FAD_1809 | FAD_1806 | FAD_1809 | Hypothetical protein. | Hypothetical protein. | 0.441 |
FAD_1806 | cdc48 | FAD_1806 | FAD_1805 | Hypothetical protein. | Cell division cycle protein 48. | 0.452 |
FAD_1806 | thrB | FAD_1806 | FAD_1808 | Hypothetical protein. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.441 |
FAD_1807 | FAD_1806 | FAD_1807 | FAD_1806 | Hypothetical protein. | Hypothetical protein. | 0.682 |
FAD_1807 | FAD_1809 | FAD_1807 | FAD_1809 | Hypothetical protein. | Hypothetical protein. | 0.492 |
FAD_1807 | cdc48 | FAD_1807 | FAD_1805 | Hypothetical protein. | Cell division cycle protein 48. | 0.406 |
FAD_1807 | thrB | FAD_1807 | FAD_1808 | Hypothetical protein. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.492 |
FAD_1809 | FAD_1806 | FAD_1809 | FAD_1806 | Hypothetical protein. | Hypothetical protein. | 0.441 |
FAD_1809 | FAD_1807 | FAD_1809 | FAD_1807 | Hypothetical protein. | Hypothetical protein. | 0.492 |
FAD_1809 | thrB | FAD_1809 | FAD_1808 | Hypothetical protein. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.988 |
cdc48 | FAD_1806 | FAD_1805 | FAD_1806 | Cell division cycle protein 48. | Hypothetical protein. | 0.452 |
cdc48 | FAD_1807 | FAD_1805 | FAD_1807 | Cell division cycle protein 48. | Hypothetical protein. | 0.406 |
thrB | FAD_1806 | FAD_1808 | FAD_1806 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Hypothetical protein. | 0.441 |
thrB | FAD_1807 | FAD_1808 | FAD_1807 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Hypothetical protein. | 0.492 |
thrB | FAD_1809 | FAD_1808 | FAD_1809 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | Hypothetical protein. | 0.988 |