Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FAD_0017 | FAD_0599 | FAD_0017 | FAD_0599 | Molybdopterin biosynthesis MoeB protein. | Phosphomethylpyrimidine kinase. | 0.857 |
| FAD_0017 | FAD_0757 | FAD_0017 | FAD_0757 | Molybdopterin biosynthesis MoeB protein. | Molybdenum cofactor biosynthesis protein C. | 0.707 |
| FAD_0017 | FAD_1374 | FAD_0017 | FAD_1374 | Molybdopterin biosynthesis MoeB protein. | ATPase of the PP-loop superamily. | 0.632 |
| FAD_0017 | cysK | FAD_0017 | FAD_0825 | Molybdopterin biosynthesis MoeB protein. | Cysteine synthase. | 0.578 |
| FAD_0017 | thiE | FAD_0017 | FAD_0597 | Molybdopterin biosynthesis MoeB protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.875 |
| FAD_0017 | thiI | FAD_0017 | FAD_1813 | Molybdopterin biosynthesis MoeB protein. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.985 |
| FAD_0599 | FAD_0017 | FAD_0599 | FAD_0017 | Phosphomethylpyrimidine kinase. | Molybdopterin biosynthesis MoeB protein. | 0.857 |
| FAD_0599 | thiE | FAD_0599 | FAD_0597 | Phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
| FAD_0599 | thiI | FAD_0599 | FAD_1813 | Phosphomethylpyrimidine kinase. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.919 |
| FAD_0599 | truA | FAD_0599 | FAD_0231 | Phosphomethylpyrimidine kinase. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.661 |
| FAD_0757 | FAD_0017 | FAD_0757 | FAD_0017 | Molybdenum cofactor biosynthesis protein C. | Molybdopterin biosynthesis MoeB protein. | 0.707 |
| FAD_0757 | miaB | FAD_0757 | FAD_1628 | Molybdenum cofactor biosynthesis protein C. | Archaeal tRNA modifying enzyme. | 0.412 |
| FAD_0757 | thiI | FAD_0757 | FAD_1813 | Molybdenum cofactor biosynthesis protein C. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.988 |
| FAD_0757 | truA | FAD_0757 | FAD_0231 | Molybdenum cofactor biosynthesis protein C. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.492 |
| FAD_1374 | FAD_0017 | FAD_1374 | FAD_0017 | ATPase of the PP-loop superamily. | Molybdopterin biosynthesis MoeB protein. | 0.632 |
| FAD_1374 | metX | FAD_1374 | FAD_0477 | ATPase of the PP-loop superamily. | methionyl-tRNA synthetase tRNA-binding subunit. | 0.432 |
| FAD_1374 | miaB | FAD_1374 | FAD_1628 | ATPase of the PP-loop superamily. | Archaeal tRNA modifying enzyme. | 0.524 |
| FAD_1374 | thiI | FAD_1374 | FAD_1813 | ATPase of the PP-loop superamily. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.934 |
| FAD_1374 | truA | FAD_1374 | FAD_0231 | ATPase of the PP-loop superamily. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.701 |
| cysK | FAD_0017 | FAD_0825 | FAD_0017 | Cysteine synthase. | Molybdopterin biosynthesis MoeB protein. | 0.578 |
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