STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG05266.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (627 aa)    
Predicted Functional Partners:
AHG03810.1
Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.590
AHG02670.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
AHG04517.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
AHG05410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.444
AHG03811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
AHG03790.1
Bacterio-opsin activator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
Your Current Organism:
Halobacterium sp. DL1
NCBI taxonomy Id: 751944
Other names: H. sp. DL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.