STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQA09546.15-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)    
Predicted Functional Partners:
AQA10646.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
AQA09547.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
AQA09663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
AQA10738.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
AQA09662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.922
AQA10647.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.920
AQA10739.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.916
AQA13352.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AQA09545.1
hydroxymethylglutaryl-CoA reductase, degradative; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family.
 
     0.673
AQA10337.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.650
Your Current Organism:
Streptomyces autolyticus
NCBI taxonomy Id: 75293
Other names: S. autolyticus
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