Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQA09679.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (127 aa)    
Predicted Functional Partners:
AQA12526.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.691
AQA15465.1
Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.648
AQA14748.1
DUF2795 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.468
AQA14749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.468
AQA15610.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.468
AQA13701.1
Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.445
Your Current Organism:
Streptomyces autolyticus
NCBI taxonomy Id: 75293
Other names: S. autolyticus
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