Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQA09681.1F420-dependent methylene-tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)    
Predicted Functional Partners:
AQA09810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.783
AQA09680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AQA10167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.761
AQA14911.1
Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.731
AQA14913.1
FMN reductase (NADPH); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.715
AQA14529.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.668
AQA09287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
AQA15887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
AQA09802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
AQA09804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.666
Your Current Organism:
Streptomyces autolyticus
NCBI taxonomy Id: 75293
Other names: S. autolyticus
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