Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQA09688.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
AQA09810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.823
AQA09689.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.779
AQA09692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
AQA10167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.739
AQA09163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
AQA09283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
AQA15888.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
BV401_01065
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
AQA15889.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
AQA10006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.733
Your Current Organism:
Streptomyces autolyticus
NCBI taxonomy Id: 75293
Other names: S. autolyticus
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