Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQA10151.1 | AQA10152.1 | BV401_06315 | BV401_06320 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
AQA10151.1 | AQA10153.1 | BV401_06315 | BV401_06325 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
AQA10152.1 | AQA10151.1 | BV401_06320 | BV401_06315 | PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | 0.685 |
AQA10152.1 | AQA10153.1 | BV401_06320 | BV401_06325 | PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.551 |
AQA10153.1 | AQA10151.1 | BV401_06325 | BV401_06315 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. | 0.413 |
AQA10153.1 | AQA10152.1 | BV401_06325 | BV401_06320 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PPOX class F420-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.551 |
AQA10153.1 | AQA10154.1 | BV401_06325 | BV401_06330 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.471 |
AQA10153.1 | AQA13008.1 | BV401_06325 | BV401_23755 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
AQA10154.1 | AQA10153.1 | BV401_06330 | BV401_06325 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
AQA13008.1 | AQA10153.1 | BV401_23755 | BV401_06325 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |