STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107548114Thyroid transcription factor 1-associated protein 26 homolog. (257 aa)    
Predicted Functional Partners:
LOC107590743
Protein LLP homolog isoform X1.
   
    0.865
llph
Protein LLP homolog.
   
    0.865
ENSSGRP00000106380
RNA binding motif protein 42.
      
 0.586
LOC107591242
Coiled-coil domain-containing protein 58.
   
    0.566
LOC107584995
Coiled-coil domain-containing protein 58-like.
   
    0.566
ENSSGRP00000006068
39S ribosomal protein L55, mitochondrial-like.
      
 0.565
ENSSGRP00000009619
39S ribosomal protein L55, mitochondrial-like.
      
 0.565
Denr
Density-regulated protein.
   
    0.565
LOC107554538
Density-regulated protein-like.
   
    0.565
brix1
Biogenesis of ribosomes BRX1.
   
  
 0.564
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.