Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000000034annotation not available (113 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
   
 0.734
ENSSGRP00000090841
CHM Rab escort protein.
    
 0.658
ENSSGRP00000110209
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.658
ENSSGRP00000002207
Dynein, cytoplasmic 1, light intermediate chain 2.
    
  0.609
ENSSGRP00000012222
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
  0.609
LOC107562216
Cytoplasmic dynein 1 light intermediate chain 2-like isoform X1.
    
  0.609
LOC107591989
Cytoplasmic dynein 1 light intermediate chain 1-like isoform X1.
    
  0.609
ENSSGRP00000043877
annotation not available
    
  0.608
ENSSGRP00000084464
Rubicon autophagy regulator.
    
  0.608
LOC107585070
Exocyst complex component 4-like.
    
 0.569
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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