STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107562295Semaphorin-3aa. (874 aa)    
Predicted Functional Partners:
ENSSGRP00000030465
Neuropilin 1a.
  
 
 0.928
LOC107565689
Neuropilin-1a.
    
 0.913
PLXNA2
Plexin-A2-like.
  
 
 0.714
ENSSGRP00000025869
Cyclin-dependent kinase 5.
     
 0.711
ENSSGRP00000024696
Plexin-A4-like.
    
 0.699
ENSSGRP00000049071
Plexin-A4.
    
 0.699
LOC107594012
Plexin-A2-like.
    
0.654
LOC107574004
Proto-oncogene tyrosine-protein kinase Met.
    
 0.637
ENSSGRP00000015112
Macrophage stimulating 1 receptor b.
    
 0.637
ENSSGRP00000054750
annotation not available
    
 0.637
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.