STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107594131Ankyrin repeat domain-containing protein 16-like. (367 aa)    
Predicted Functional Partners:
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.588
ift52
Intraflagellar transport protein 52 homolog.
    
 0.552
LOC107585317
Non-structural maintenance of chromosomes element 4 homolog A-like isoform X1.
    
 
 0.533
LOC107588653
Non-structural maintenance of chromosomes element 4 homolog A-like.
    
 
 0.533
ENSSGRP00000038511
Kelch-like family member 30.
   
  0.513
ENSSGRP00000106101
Kelch-like family member 30.
   
  0.513
LOC107587543
Ankyrin repeat domain-containing protein 12-like.
  
 
  0.512
wars1
Tryptophan--tRNA ligase, cytoplasmic isoform X1.
   
 
 0.511
ENSSGRP00000040302
Ankyrin repeat domain 31.
  
 
  0.509
LOC107559444
Ankyrin repeat domain-containing protein 39-like isoform X1.
  
     0.504
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.