Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107594131Ankyrin repeat domain-containing protein 16-like. (367 aa)    
Predicted Functional Partners:
pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
 0.701
LOC107587767
Arginine/serine-rich protein PNISR-like isoform X1.
   
 0.701
LOC107586897
Iron-sulfur cluster assembly 2 homolog, mitochondrial-like.
      
 0.644
LOC107561668
Iron-sulfur cluster assembly 2 homolog, mitochondrial-like isoform X1.
      
 0.644
LOC107585317
Non-structural maintenance of chromosomes element 4 homolog A-like isoform X1.
    
 
 0.635
LOC107588653
Non-structural maintenance of chromosomes element 4 homolog A-like.
    
 
 0.635
ENSSGRP00000050083
F-box protein, helicase, 18.
     
 0.614
ENSSGRP00000092521
F-box DNA helicase 1.
     
 0.614
ENSSGRP00000006053
Splicing factor 45-like.
    
 
 0.608
ENSSGRP00000102484
RNA binding motif protein 17.
    
 
 0.608
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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