STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585127Rab GDP dissociation inhibitor beta-like. (476 aa)    
Predicted Functional Partners:
LOC107577469
Rab5 GDP/GTP exchange factor-like isoform X1.
    
 0.900
ENSSGRP00000034707
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.900
ENSSGRP00000055376
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.900
ENSSGRP00000071444
annotation not available
    
 0.900
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
   
 0.889
LOC107552273
Ras-related protein Rab-6B.
   
 0.842
rab6a
Ras-related protein Rab-6A isoform X1.
   
 0.842
LOC107564716
Ras-related protein Rab-6B-like.
   
 0.842
ENSSGRP00000047604
RAB6A, member RAS oncogene family.
   
 0.842
LOC107560298
Ras-related protein Rab-6B-like.
   
 0.842
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.